Distinct antibody repertoires against endemic human coronaviruses in children and adults

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Taushif Khan

Fatima Al Ali

Susie S. Y. Huang

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Immunology

Manar Ata

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Immunology

Qian Zhang

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Immunology

Paul Bastard

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Immunology

Zhiyong Liu

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Immunology

Emmanuelle Jouanguy

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Immunology

Vivien Béziat

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Immunology

Aurélie Cobat

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Immunology

Gheyath K. Nasrallah

Hadi Yassine

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Immunology

Maria Smatti

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Immunology

Amira Sayeed

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Immunology

Isabelle Vandernoot

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Immunology

Jean-Christophe Goffard

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Immunology

Guillaume Smits

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Immunology

Isabelle Migeotte

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Immunology

Filomeen Haerynck

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Immunology

Isabelle Meyts

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Immunology

Laurent Abel

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Immunology

Jean-Laurent Casanova

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Immunology

Mohammad R. Hasan

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Immunology

Nico Marr

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Four endemic human coronaviruses (HCoVs) are commonly associated with acute respiratory infection in humans. B cell responses to these “common cold” viruses remain incompletely understood. Here we report a comprehensive analysis of CoV-specific antibody repertoires in 231 children and 1168 adults using phage-immunoprecipitation sequencing. Seroprevalence of antibodies to endemic HCoVs ranged between ~4 and 27% depending on the species and cohort. We identified at least 136 novel linear B cell epitopes. Antibody repertoires against endemic HCoVs were qualitatively different between children and adults in that anti-HCoV IgG specificities more frequently found among children targeted functionally important and structurally conserved regions of the spike, nucleocapsid and matrix proteins. Moreover, antibody specificities targeting the highly conserved fusion peptide region and S2’ cleavage site of the spike protein were broadly cross-reactive with peptides of epidemic human and non-human coronaviruses. In contrast, an acidic tandem repeat in the N-terminal region of the Nsp3 subdomain of the HCoV-HKU1 polyprotein was the predominant target of antibody responses in adult donors. Our findings shed light on the dominant species-specific and pan-CoV target sites of human antibody responses to coronavirus infection, thereby providing important insights for the development of prophylactic or therapeutic monoclonal antibodies and vaccine design. ### Competing Interest Statement The authors have declared no competing interest.

Immunology
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